Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889409.1_cds_XP_016444105.1_39203
CDS Infomation

[gene=LOC107769413] [db_xref=GeneID:107769413] [protein=DNA excision repair protein ERCC-8-like isoform X1] [protein_id=XP_016444105.1] [location=complement(join(36421..36474,36598..36669,37244..37333,37425..37579,39274..39514,41322..41500,45468..45627,45745..45992,47869..48067))] [gbkey=CDS]
Sequence

ATGCGAGGAAGATGTGGAAGGAGATTGCAGACCGAGAATTTGGGAAGCTTCGCCCTAATT
TATTCAGCAATTGTATTAAGTCGTCTCGAGTCTCTTCTCTTCAACTCTCCAACTACAAAG
ATATCATTTCTCCTCACCGTGGCTCCGTCAACTCCCTACAGGTCAATTTCCCCATTTCTC
GATCTACGATTTGAAGTTGAGGGACGATATCTGTTATCCTCTGGTTCGGATGCATCAGTT
GCTGTTTATGACGTTCAACGTGCAACTGATTATGACGGAAATGGTCTGATTGCAAAGCAT
AAGCCCATAGCTGTGGTTGACAAGCAACACGAACAGGGGCACAAGTATGCCATTTCCACA
GCCATCTGGTATCCAATTGACACGGGGCTTTTCATTACGGGATCATATGATCATTACATT
AATGTTTGGGATACTAACACTACTCAGGTGGCAGTTAATTTCAAAATGCCTGGAAAAGTT
TACAAGACTGCCATGTCTCCCGTGGCAACATCACACATGTTGATTGCTGCTGGAACTGAA
GATGTTCAAGTTCGTCTTTGTGATATTTCTTCGGGTGCATTTTCTCACACATTATCTGGC
CATCGTGATGGAGTAATGTCAGTTGAATGGTCTGCTTCTAGTGAGTGGGTTTTGGTAACA
GGGGGATGCGATGGTGCCATTCGCTTTTGGGACATCAGGCGTACAGGATGCTTTCGTGTT
TTAGATCAGTCCCATTCTCAGCTTGGAAGACGCCTAACTCTACTTACACGTTCTGTTACA
AACAAGAGTTCCACGCTAAAATCATCTTCAGCAGGCCCAAGTTCATCTGCAAAAGGCCGG
CCATCTCATAAGAAAATGGGGAATGGTATGTGTATCAAACAATCTGCAATTGCTAGACAA
GTGAGGGGGGCTGGAAAGCAGAGACTACATCCAGGGATGCTGTCTAGTCAGGATAGAGCT
ACTGCTCATTATGGTGCTGTCAACGGACTAAAAGTCACCAATGATGGAATGTATCTTCTT
AGTGCAGGTTCTGATTCTAGGTTAAGGTTATGGGATATCGAATCTGGTTGCAATACACTT
GTGAACTTTGAAACATCACGACTACAGGCCACCAAAGCTATACAATTAGCCATCTCTCAT
GATTCAAAACTTGTATTTGCGCCATGCATGTCAACAACTAAGGCATTTGATTTGTGGTCG
GGCAAGACGATGATGGATTTACGTGGACACTATGAAAATGTGAACTGTTGTCTGTACAGT
GCACTGGACCAGGAACTATACACAGGTGGTAATGATCGGAAAATTCTCGTTTGGTCTTCA
AGCAAAGTCGCAACTGAAGAATTGGAGGGAAGGGACGGGCAAGCTTTTGCGATGGATCAA
GATAATTGGAGTGACTGA

Peptide Sequence

PEP ID

XP_016444105.1
PEP Infomation

PREDICTED: DNA excision repair protein ERCC-8-like isoform X1 [Nicotiana tabacum]
Sequence

MRGRCGRRLQTENLGSFALIYSAIVLSRLESLLFNSPTTKISFLLTVAPSTPYRSISPFL
DLRFEVEGRYLLSSGSDASVAVYDVQRATDYDGNGLIAKHKPIAVVDKQHEQGHKYAIST
AIWYPIDTGLFITGSYDHYINVWDTNTTQVAVNFKMPGKVYKTAMSPVATSHMLIAAGTE
DVQVRLCDISSGAFSHTLSGHRDGVMSVEWSASSEWVLVTGGCDGAIRFWDIRRTGCFRV
LDQSHSQLGRRLTLLTRSVTNKSSTLKSSSAGPSSSAKGRPSHKKMGNGMCIKQSAIARQ
VRGAGKQRLHPGMLSSQDRATAHYGAVNGLKVTNDGMYLLSAGSDSRLRLWDIESGCNTL
VNFETSRLQATKAIQLAISHDSKLVFAPCMSTTKAFDLWSGKTMMDLRGHYENVNCCLYS
ALDQELYTGGNDRKILVWSSSKVATEELEGRDGQAFAMDQDNWSD

Transcript Sequence

Gene sequence data has not been registered.